Autoroller updated protobuf which has some different files now.

Change-Id: If3b2f6452d30e754504e8798de5adb8706371cb5
Reviewed-on: https://chromium-review.googlesource.com/c/v8/v8/+/1547866
Auto-Submit: Peter Marshall <petermarshall@chromium.org>
Commit-Queue: Jakob Gruber <jgruber@chromium.org>
Reviewed-by: Jakob Gruber <jgruber@chromium.org>
Cr-Commit-Position: refs/heads/master@{#60571}